Docking (PADA1)
| Example Files | |
|---|---|
 Docking.pdb |
Docking.cfg |
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Download and Copy Docking.pdb and Docking.cfg into your working directory and type: >modelX -f Docking.cfg
Or check the command line tab |
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>modelx --command=Docking --pdb=Docking.pdb --pep-mismatches=2 --dock-length=6 --pepx-length=6 --dubiety=0.1 --sections=72 --cbeta-angles=5 --mol=* --residue-begin=2 --residue-end=245 --fit-threshold=0.5 --fit-level=2 --min-contacts=2 --quick-scan=false --pep-threshold=18 --energy-threshold=-0.1 --atom-type=BB --deep-scan=true --double-check=true --database-name=DnaXDB --database-server=localhost --database-user=modelx --database-pass=modelx
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